Integrated Resource Management Applications

Water | Water Quality | Microorganisms

Ecological Framework · 192 publicly available references · page 1 of 2

Microbial Studies of a High Alpine Water Supply Used for Recreation Academic · 2010 · Reference 77691
Diatom Monitoring Protocol Version 1.0: Great Lakes Inventory and Monitoring Network Published Report · 2008 · Reference 660627
Climate-induced changes in lake ecosystem structure inferred from coupled neo- and paleoecological approaches Journal Article · 2012 · Reference 2190766
Biomonitoring using diatoms and paleolimnology in the western Great Lakes national parks. Published Report · 2012 · Reference 2191475
NCCN Monitoring Mountain Lakes Project · 2005 · Reference 2193721
Large lowland lake monitoring protocol: North Coast and Cascades Network Published Report · 2013 · Reference 2194301
Navicula whitefishensis, a New Diatom (Bacillariophyta) From the Northern Rockies Journal Article · 2012 · Reference 2194686
Encyonopsis (Bacillariophyta, Cymbellaceae) from western North America: 31 species from Alberta, Idaho, Montana, Oregon, South Dakota, and Washington, including 17 species described as new Journal Article · 2013 · Reference 2194689
NCCN Monitoring Large Lowland Lakes Project · 2012 · Reference 2195574
North Coast and Cascades Inventory and Monitoring Network (NCCN) Program · 2001 · Reference 2195782
METHODOS FOR COLLECTING BENTHI INVERTEBRATE SAMPLES AS PART OF THE NATIONAT WATER-QUALITY ASSESSMENT PROGRAM Published Report · 1993 · Reference 2195806
METHODS FOR THE COLLECTION OF PERIPHYTON IN THE TRINITY RIVER BASIN AS PART OF THE NATIONAL WATER QUALITY ASSESSMENT PROGRAM Protocol Development Summary · 1993 · Reference 2195811
Glacial transport of human waste and survival of fecal bacteria on Mt. McKinley’s Kahiltna Glacier, Denali National Park, Alaska Published Report · 2013 · Reference 2197876
A Synthesis of Aquatic Science for Management of Lakes Mead and Mohave Published Report · 2012 · Reference 2204193
Identified Species of Zoosporic Fungi, Order Saprolegniales, from the Smoky Mountains Unpublished Report · 2001 · Reference 2205112
Evaluation of Microbial Activity and Nitrogen Dynamics along Selected National Park Watershed Sites Academic · 2013 · Reference 2205284
Streams monitoring at Montezuma Castle and Tuzigoot national monuments: Status report for water years 2009–2011 Published Report · 2014 · Reference 2209899
Central Alaska Inventory and Monitoring Network (CAKN) Program · 2001 · Reference 2210836
Sonoran Desert & Southern Plains Streams Monitoring Resource Brief · 2010 · Reference 2214956
Crystal Formation by Microorganisms in the Dunes & Soils at White Sands NM Resource Brief · 2012 · Reference 2215442
Shallow Lake Monitoring in the Arctic and Central Alaska Networks of National Parklands. Project · 2004 · Reference 2215910
Streams monitoring at Tumacácori National Historical Park: 2011 summary report Published Report · 2014 · Reference 2218584
Chemolithotrophic growth of the aerobic hyperthermophilic bacterium Thermocrinis ruber OC 14/7/2 on monothioarsenate and arsenite Journal Article · 2014 · Reference 2218893
Aquatic biodiversity, community composition and ecosystem processes in upper Noatak River basin: Gates of the Arctic Park and Preserve and the Noatak National Preserve, Alaska Unpublished Report · 2005 · Reference 2220836
Arctic Network Freshwater Vital Signs Initiative Project · 2009 · Reference 2220838
Microbial biogeography of streams in the Feniak Lake region, Noatak National Preserve, Alaska: Exploring influences of lithology and habitat Unpublished Report · 2009 · Reference 2220843
Streams and Lake Monitoring Protocol Arctic Network National Parks and Preserves, Alaska Protocol Narrative · 2015 · Reference 2220847
Complete Genome Sequence of Geobacillus strain Y4.1MC1, a Novel CO-Utilizing Geobacillus thermoglucosidasius Strain Isolated from Bath Hot Spring in Yellowstone National Park Journal Article · 2015 · Reference 2220892
Everglades Restoration Impacts on Biscayne Bay's Shallowest Habitats: Linking Seasonal Patterns in Benthic Community Structure with Salinity and Temperature Patterns Published Report · 2006 · Reference 2221422
Crustacean Communities from Surface Groundwater in the Rocky Glades Published Report · 2004 · Reference 2221536
Diatom-based Water Quality Performance Metrics Published Report · 2006 · Reference 2221642
Biscayne Bay's Nearshore Habitats: Linking Seasonal Patterns in Benthic Community Structure with Salinity Published Report · 2008 · Reference 2221674
Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park Journal Article · 2012 · Reference 2221980
Central Alaska Network flowing waters monitoring program: 2011 annual report Published Report · 2015 · Reference 2222019
Water quality data summary report for Bighorn Canyon National Recreation Area: Preliminary analysis of 2014 data Published Report · 2015 · Reference 2223020
The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales Journal Article · 2015 · Reference 2223365
Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous ‘streamer’ community Journal Article · 2015 · Reference 2223370
Extraordinary solute-stress tolerance contributes to the environmental tenacity of mycobacteria Journal Article · 2015 · Reference 2223472
The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat Journal Article · 2015 · Reference 2223841
Draft Genome Sequence of Thermoanaerobacter sp. Strain YS13, a Novel Thermophilic Bacterium Journal Article · 2015 · Reference 2223853
An environmental survey of Serpentine Hot Springs: Geology, hydrology, geochemistry, and microbiology Published Report · 2015 · Reference 2224027
Divergence with gene flow in a population of thermophilic bacteria: a potential role for spatially varying selection Journal Article · 2014 · Reference 2224170
The molecular dimension of microbial species: 2. Synechococcus strains representative of putative ecotypes inhabiting different depths in the Mushroom Spring microbial mat exhibit different adaptive and acclimative responses to light Journal Article · 2015 · Reference 2224700
Anaerobic Thermophiles Journal Article · 2014 · Reference 2224705
‘Geoarchaeote NAG1’ is a deeply rooting lineage of the archaeal order Thermoproteales rather than a new phylum Journal Article · 2014 · Reference 2224707
Fine-scale diversity and extensive recombination in a quasisexual bacterial population occupying a broad niche Journal Article · 2015 · Reference 2224930
Carbon source preference in chemosynthetic hot spring communities Journal Article · 2015 · Reference 2224934
Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes Journal Article · 2015 · Reference 2224949
Prokaryotic cells separated from sediments are suitable for elemental composition analysis Journal Article · 2014 · Reference 2224952
Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park Journal Article · 2015 · Reference 2224961
Anthropogenic Soil Disturbance Affects and Baseline Inventory of Archaea for the George Washington Memorial Parkway, McLean Virginia Unpublished Report · 2015 · Reference 2225477
Taxonomic Inventory of Tachinidae in Great Smoky Mountains National Park with Special Emphasis on the Subfamily Phasiinae Generic Dataset · 2015 · Reference 2226107
Competition for Ammonia Influences the Structure of Chemotrophic Communities in Geothermal Springs Journal Article · 2014 · Reference 2227178
Production and early preservation of lipid biomarkers in iron hot springs. Journal Article · 2014 · Reference 2227184
Diversity of putative archaeal RNA viruses in metagenomic datasets of a yellowstone acidic hot spring Journal Article · 2015 · Reference 2227186
Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms Journal Article · 2015 · Reference 2227190
Phylogenetic analysis of HpnP reveals the origin of 2-methylhopanoid production in Alphaproteobacteria Journal Article · 2015 · Reference 2227194
Nutrient requirements and growth physiology of the photoheterotrophic Acidobacterium, Chloracidobacterium thermophilum Journal Article · 2015 · Reference 2227195
Genome Sequences of the Lignin-Degrading Pseudomonas sp. Strain YS-1p and Rhizobium sp. Strain YS-1r Isolated from Decaying Wood Journal Article · 2015 · Reference 2227197
Ok-A-Beh potable water spring water collection system and groundwater well assessment - Bighorn Canyon National Recreation Area Technical Assistance Report · 2015 · Reference 2227270
In situ analysis of oxygen consumption and diffusive transport in high-temperature acidic iron-oxide microbial mats Journal Article · 2013 · Reference 2227341
Viral assemblage composition in Yellowstone acidic hot springs assessed by network analysis Journal Article · 2015 · Reference 2227343
Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park Journal Article · 2015 · Reference 2227345
Complete Genome Sequence of Geobacillus strain Y4.1MC1, a Novel CO-Utilizing Geobacillus thermoglucosidasius Strain Isolated from Bath Hot Spring in Yellowstone National Park Journal Article · 2015 · Reference 2227346
Complete Genome Sequence of Thermus aquaticus Y51MC23 Journal Article · 2015 · Reference 2227347
Tracing Biosignature Preservation of Geothermally Silicified Microbial Textures into the Geological Record Journal Article · 2015 · Reference 2227349
Geyserite in hot-spring siliceous sinter:Window on Earth's hottest terrestrial (paleo)environment and its extreme life Journal Article · 2015 · Reference 2227350
Accessible Microbial Flora of the Madison Aquifer: Investigations in Calcite Lake, Wind Cave, Wind cave National Park [Final Report] Unpublished Report · 2012 · Reference 2228013
In situ gene expression profiling of the thermoacidophilic alga Cyanidioschyzon in relation to visible and ultraviolet irradiance Journal Article · 2014 · Reference 2229593
Cyanidiales diversity in Yellowstone National Park Journal Article · 2013 · Reference 2229595
Lytic viruses infecting organisms from the three domains of life Journal Article · 2013 · Reference 2229603
Insights into a Viral Lytic Pathway from an Archaeal Virus-Host System Journal Article · 2013 · Reference 2229605
Functional interplay between a virus and the ESCRT machinery in Archaea Journal Article · 2013 · Reference 2229606
Isolation and characterization of homodimeric type-I reaction center complex from Candidatus Chloracidobacterium thermophilum, an aerobic chlorophototroph Journal Article · 2012 · Reference 2229620
Community analysis of plant biomass-degrading microorganisms from Obsidian Pool, Yellowstone National Park Journal Article · 2015 · Reference 2229628
Ecological divergence of a novel group of Chloroflexus strains along a geothermal gradient Journal Article · 2013 · Reference 2229680
Division-specific differences in bacterial community assembly of two alkaline hot spring ecosystems from Yellowstone National Park Journal Article · 2013 · Reference 2229681
Three novel virophage genomes discovered from Yellowstone Lake metagenomes Journal Article · 2015 · Reference 2229693
Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea Journal Article · 2016 · Reference 2229695
Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost Journal Article · 2016 · Reference 2229701
Novel, deep-branching heterotrophic bacterial populations recovered from thermal spring metagenomes Journal Article · 2016 · Reference 2229703
Carbon dioxide fixation by Metallosphaera yellowstonensis and acidothermophilic iron-oxidizing microbial communities from Yellowstone National Park Journal Article · 2014 · Reference 2229709
Geochemistry and mixing drive the spatial distribution of free-living archaea and bacteria in Yellowstone Lake Journal Article · 2016 · Reference 2229710
Formaldehyde as a carbon and electron shuttle between autotroph and heterotroph populations in acidic hydrothermal vents of Norris Geyser Basin, Yellowstone National Park Journal Article · 2016 · Reference 2229711
Substrate preference, uptake kinetics and bioenergetics in a facultatively autotrophic, thermoacidophilic crenarchaeote Journal Article · 2016 · Reference 2229719
The discovery and characterization of two archaeal viruses using culture-independent methods Academic · 2016 · Reference 2229880
The distribution, diversity and function of predominant Thermoproteales in high-temperature environments of Yellowstone National Park Journal Article · 2016 · Reference 2229881
Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: heterotrophic, iron-oxidizing, extremely acidophilic actinobacteria Journal Article · 2009 · Reference 2229882
The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. I. Microbial Diversity Based on 16S rRNA Gene Amplicons and Metagenomic Sequencing Journal Article · 2016 · Reference 2230324
Zooplankton community differences among four main pools of Lake St. Croix (Minnesota–Wisconsin) 2010–2011 Published Report · 2016 · Reference 2231864
Ecological differentiation in planktonic and sediment-associated chemotrophic microbial populations in Yellowstone hot springs Journal Article · 2016 · Reference 2232004
The genetics of extreme microgeographic adaptation: an integrated approach identifies a major gene underlying leaf trichome divergence in Yellowstone Mimulus guttatus Journal Article · 2016 · Reference 2232012
Silica Biomineralization of Calothrix-Dominated Biofacies from Queen's Laundry Hot-Spring, Yellowstone National Park, USA Journal Article · 2016 · Reference 2233041
Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment Journal Article · 2016 · Reference 2233044
Status of climate and water resources at Tumacácori National Historical Park: Water year 2015 Published Report · 2016 · Reference 2233075
Water quality monitoring protocol for streams and springs in the Southern Colorado Plateau Network Published Report · 2016 · Reference 2233293
Microbes in mercury-enriched geothermal springs in western North America Journal Article · 2016 · Reference 2233828
Stoichiometric modelling of assimilatory and dissimilatory biomass utilisation in a microbial community Journal Article · 2016 · Reference 2233829
Standard Operating Procedure #2: Hiring and Training Field Personnel. Version 20160901 Standard Operating Procedure · 2016 · Reference 2235256
Standard Operating Procedure #3: Selecting and Documenting a Water Quality Monitoring Site, Version 20160901 Standard Operating Procedure · 2016 · Reference 2235259